SQL-based data linkage
Overhaul of data linkage back-end:
- Pandas instead of R Tidyverse for initial loading
- Defining schemas for all dataasets
- Except for ynamically inferring clinical data - changes all the time
- Simple dataframe/SQL load and CSV export, instead of symlinking CSVs
- Set up system for re-linking columns
- Sample barcode in LIMS data
- New assays_done report - takes into account what samples have been dispatched
- New test data