Postgres back-end
- Version 1.0
🎉 - Postgres backend:
-
isaric
schema name -
isaric_admin
read/write role - drops known data linkage tables before doing a new release
- database versioning with pg_dump exports
- Renaming WP5 RNA-seq report columns - Postgres didn't like some of them
- New environment variables: PGPASSFILE (optional), ISARIC_LINKAGE_CREDENTIALS
- New CI system
- Docker executor
-
- Generic SQLite/Postgres-compatible function for day comparisons
- Lazy-loading configs
- Cleaning up circular imports in index table queries
- Assays done report:
- ported to SQLAlchemy
- sample_assays is now a SQL table, not a WITH statement
- New Conda dependency: postgresql=12.3 (client binaries)
- Closes #10 (closed)