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multiscale
lammps
Commits
562296bd
Commit
562296bd
authored
6 years ago
by
Oliver Henrich
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Updated link to preprint article
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doc/src/fix_nve_dot.txt
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doc/src/fix_nve_dot.txt
doc/src/fix_nve_dotc_langevin.txt
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doc/src/fix_nve_dotc_langevin.txt
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doc/src/fix_nve_dot.txt
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562296bd
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@@ -36,8 +36,8 @@ The command is equivalent to the "fix nve"_fix_nve.html.
The particles are always considered to have a finite size.
An example input file can be found in /examples/USER/cgdna/examples/duplex1/.
A technical report with more information on this integrator can be found
"here"_PDF/USER-CGDNA
-overview
.pdf.
Further details of the implementation and stability of the integrator are contained in "(Henrich)"_#Henrich3.
The preprint version of the article can be found
"here"_PDF/USER-CGDNA.pdf.
:line
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@@ -59,3 +59,5 @@ See the "Build package"_Build_package.html doc page for more info.
[(Davidchack)] R.L Davidchack, T.E. Ouldridge, and M.V. Tretyakov. J. Chem. Phys. 142, 144114 (2015).
:link(Miller1)
[(Miller)] T. F. Miller III, M. Eleftheriou, P. Pattnaik, A. Ndirango, G. J. Martyna, J. Chem. Phys., 116, 8649-8659 (2002).
:link(Henrich3)
[(Henrich)] O. Henrich, Y. A. Gutierrez-Fosado, T. Curk, T. E. Ouldridge, Eur. Phys. J. E 41, 57 (2018).
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doc/src/fix_nve_dotc_langevin.txt
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562296bd
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@@ -114,8 +114,8 @@ The scale factor after the {angmom} keyword gives the ratio of the rotational to
the translational friction coefficient.
An example input file can be found in /examples/USER/cgdna/examples/duplex2/.
A technical report with more information on this integrator can be found
"here"_PDF/USER-CGDNA
-overview
.pdf.
Further details of the implementation and stability of the integrators are contained in "(Henrich)"_#Henrich4.
The preprint version of the article can be found
"here"_PDF/USER-CGDNA.pdf.
:line
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@@ -139,3 +139,5 @@ See the "Build package"_Build_package.html doc page for more info.
[(Miller)] T. F. Miller III, M. Eleftheriou, P. Pattnaik, A. Ndirango, G. J. Martyna, J. Chem. Phys., 116, 8649-8659 (2002).
:link(Dunweg3)
[(Dunweg)] B. Dunweg, W. Paul, Int. J. Mod. Phys. C, 2, 817-27 (1991).
:link(Henrich4)
[(Henrich)] O. Henrich, Y. A. Gutierrez-Fosado, T. Curk, T. E. Ouldridge, Eur. Phys. J. E 41, 57 (2018).
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