update bundled version of moltemplate to v1.40

...aterTIP3P+isobutane/images/water+isobutane_t=840ps_LR.jpg

...s/force_field_AMBER/waterTIP3P+isobutane/images/water.jpg

...AMBER/waterTIP3P+isobutane/moltemplate_files/isobutane.lt

...ld_AMBER/waterTIP3P+isobutane/moltemplate_files/system.lt

...obutane/optional_cleanup/README_remove_irrelevant_info.sh

...xamples/force_field_AMBER/waterTIP3P+isobutane/run.in.npt

...xamples/force_field_AMBER/waterTIP3P+isobutane/run.in.nvt

tools/moltemplate/examples/force_field_OPLSAA/WARNING.TXT

...xamples/force_field_OPLSAA/alkane_chain_single/README.TXT

...ples/force_field_OPLSAA/alkane_chain_single/README_run.sh

...es/force_field_OPLSAA/alkane_chain_single/README_setup.sh

...rce_field_OPLSAA/alkane_chain_single/README_visualize.txt

...orce_field_OPLSAA/alkane_chain_single/images/ch2_ry90.jpg

...orce_field_OPLSAA/alkane_chain_single/images/ch3_ry60.jpg

...les/force_field_OPLSAA/alkane_chain_single/images/t=0.jpg

...s/force_field_OPLSAA/alkane_chain_single/images/t=1ns.jpg

..._OPLSAA/alkane_chain_single/moltemplate_files/alkane50.lt

..._OPLSAA/alkane_chain_single/moltemplate_files/ch2group.lt

..._OPLSAA/alkane_chain_single/moltemplate_files/ch3group.lt

...n_single/moltemplate_files/oplsaa_lt_generator/AUTHOR.TXT