Includes documentation and examples.
NOTE: VV requires very small timesteps under isoenergetic conditions.
Consider using fix_shardlow instead, since this VV support is
primarily for comparison purposes.

collected documentation updates and corrections from LAMMPS-ICMS

Collected small changes and bugfixes

This reverts commit 83bcdb6a.

This reverts commit 4921dc18.

fixes formatting issues due to tabs, permission issues and
a few typos and badly worded text.

Colvars 2016-10-05

Some more cmap-related updates for ch2lmp

Merge branch 'USER-DPD_pair_exp6_rx_mathfix' of https://github.com/timattox/lammps_USER-DPD into small-changes

This closes #201

Merge branch 'USER-DPD_hybrid_atom_bugfix' of https://github.com/timattox/lammps_USER-DPD into small-changes

This closes #200

this closes #56

this closes #182

USER-QUIP related improvements from github user albapa. This closes #198

some more updates to the README file to reflect the inclusion of the CMAP example and renamed file names

added tweak to write out the command line used for the conversion to the beginning of the LAMMPS input

bugfix for eam/alloy/omp and eam/fs/omp

Revert type checking commit from July

correct the bug discovered by stan due to uninitialized scale factors for eam/alloy/omp and eam/fs/omp

0aebb2eabea6ae3f5365951335ac3d698ab9ad9e

Updated charmm2lammps

Small bufixes and enhancements