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Created with Raphaël 2.2.028Oct262524232221201918171615121110985432128Sep272524232019181714121110976543131Aug3029282726252423222120171615141312109876532131Jul30292827Merge branch 'master' of github.com:gtribello/lammps into fix-plumedcmake: add support USER-PLUMEDadd feature to python lib install script to support existing installation and use linksremove file that is not presentrework some of the pull request instructions to be realigned with the recent changes in the workflow.correct link to github tutorial in CONTRIBUTING docAdded new version of Plumed wrapperdoc files for new parallel dump file read capabilityadd parallel file read capability to ReadDumpmake 2 copy of old read_dump and rerun for comparison to newAdded instructions on PLUMED to build extras and Package details pages of manualMerge remote-tracking branch 'upstream/master'Merged Pablo's fixes into the plumed interface for lammpsMerge pull request #1177 from lammps/modify-reorderreorder operations in init() to fix a bug with compute chunk/atom deleting a fixmore tweaksformatting tweakmore tweaks from style check scriptchange intro to each list of commandsMerge pull request #1172 from akohlmey/next-patch-releaseMerge pull request #1174 from akohlmey/fix-kspace-refactorMerge pull request #1152 from lammps/doc-adjust2fix bug reported in issue #1173patch 24Oct2018Merge pull request #1164 from akohlmey/fix-halt-for-minimizeMerge pull request #1165 from akohlmey/refactor-kspace-base-classMerge pull request #1148 from akohlmey/deprecated-stylesconvert double quotes to latex styleapply fix for merge sort from issue #1163 by @jtfrey and re-enable itMerge pull request #1169 from akohlmey/kokkos-parallel-for-workaroundfix broken links in manualmake sure all pictures are includes in epub/mobi filesMerge pull request #1168 from athomps/compute-adfFixed normalization error for ordinate degreeEliminated another initialization error and tweaked rdf-adf exampleimprove check for missing styles in lammps.bookfix uninitialized data bug in compute adfadd an example for RDF and ADF computation with water moleculescorrect link to output optionsintegrate compute adf into manual build infrastructure