Update file README.md

README.md

-# pyRBDome pipeline - Ground Truth data analyses
+# pyRBDome-Notebooks - Ground Truth data analyses
 
 ## Contents
 
@@ -69,7 +69,7 @@ Unfortunately some code in pyRBDome are not compatible with Windows and we will
 These dependencies need to be installed in case you want to run the Jupyter notebooks described in the pyRBDome pipeline.
 
  - Python 3.9
- - pyRBDome classes and functions: https://git.ecdf.ed.ac.uk/sgrannem 
+ - pyRBDome-Core: pyRBDome classes and functions: https://git.ecdf.ed.ac.uk/sgrannem/pyrbdome-dev-082023
  - ncbi-blast-2.13.0+ (For building AlphaFold models https://ftp.ncbi.nlm.nih.gov/blast/executables/LATEST/)
  - interproscan-5.61-93.0 (https://interproscan-docs.readthedocs.io/en/latest/HowToRun.html)
  - MM-align (https://zhanggroup.org/MM-align/)
@@ -91,7 +91,7 @@ Then you can install the package as described below.
 
 ## Installation Guide
 
-To be able to run the pipeline, you need to install the pyRBDome package. When doing so, we strongly recommend that you install Anaconda first and then generate a new Python evironment:
+To be able to run the pipeline, you need to install the pyRBDome-Core package. When doing so, we strongly recommend that you install Anaconda first and then generate a new Python evironment:
 
 `conda create -n pyrbdome python=3.9`