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Swain Lab
aliby
alibylite
Commits
5025e81e
Commit
5025e81e
authored
1 year ago
by
pswain
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fixed merge_lineage for when no valid lineages
parent
43b39090
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src/agora/utils/merge.py
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5025e81e
...
@@ -96,6 +96,8 @@ def merge_lineage(
...
@@ -96,6 +96,8 @@ def merge_lineage(
replacement_dict
[
tuple
(
index
)]
replacement_dict
[
tuple
(
index
)]
for
index
in
flat_lineage
[
valid_lineages
]
for
index
in
flat_lineage
[
valid_lineages
]
]
]
else
:
new_merges
=
merges
# reverse flattening
# reverse flattening
new_lineage
=
flat_lineage
.
reshape
(
-
1
,
2
,
2
)
new_lineage
=
flat_lineage
.
reshape
(
-
1
,
2
,
2
)
# remove any duplicates
# remove any duplicates
...
...
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