add ci

.gitlab-ci.yml

 image: python:3.7
 
+stages:
+  - test
+  - check
+  - deploy
+
 before_script:
-  - curl -sSL https://raw.githubusercontent.com/python-poetry/poetry/master/get-poetry.py | python
-  - export PATH="$PATH:$HOME/.poetry/bin/"
-  - source $HOME/.poetry/env
+  - test -e $HOME/.poetry/bin/ || curl -sSL curl -sSL https://install.python-poetry.org | python3 -
+  - export PATH="$PATH:$HOME/.local/bin/"
+  - poetry config virtualenvs.create false
+  - rm -f poetry.lock
+  - pip install --upgrade pip
   - poetry install
-  - source `poetry env info --path`/bin/activate
 
-build:
-  stage: build
+Unit test:
+  stage: test
   script:
-    - echo 123
+    - pytest ./tests/
 
-test:
-  stage: test
+Python Code Lint:
+  stage: check
+  script:
+    - black .
+
+Static Type:
+  stage: check
+  script:
+    - mypy . --exclude 'setup\.py$'
+    # We can remove the flag once this is resolved https://github.com/pypa/setuptools/issues/2345
+
+Publish to pypi and update repository:
+  stage: deploy
   script:
-    - echo 123
+    - poetry version ${BUMP_RULE}
+    - git config --global user.email ${GITLAB_USER_EMAIL}
+    - git config --global user.name ${GITLAB_USER_NAME}
+    - git add pyproject.toml
+    - git commit -m "Bump version"
+    - git remote add origin https://${ACCESS_TOKEN_NAME}:${ACCESS_TOKEN}@${CI_SERVER_HOST}/${CI_PROJECT_PATH}.git && git push -o ci.skip origin HEAD:master
+    - poetry publish --build --username ${PYPI_USER} --password ${PYPI_PASSWORD}
+  only:
+    - master

pyproject.toml

@@ -6,14 +6,6 @@ authors = ["Alan Munoz <alan.munoz@ed.ac.uk>"]
 
 [tool.poetry.dependencies]
 python = ">=3.7.1,<3.11"
-# extraction = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/extraction"}
-# postprocessor = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/post-processing"}
-# baby = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/baby"}
-# logfile_parser = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/logfile_parser"}
-# extraction = {path="../extraction", develop=false}
-# postprocessor = {path="../postprocessor", develop=false}
-# baby = {path="../baby", develop=false}
-# logfile_parser = {path="../logfile_parser", develop=false}
 ray = {version = "1.4.0", extras = ["tune"]}
 numpy = "^1.21.4"
 dask = "^2021.12.0"
@@ -37,7 +29,10 @@ aliby-baby = "*"
 
 
 [tool.poetry.dev-dependencies]
-black = "^21.9b0"
+black = "^21.12b0"
+Sphinx = "^4.3.2"
+pytest = "^6.2.5"
+mypy = "^0.930"
 
 [build-system]
 requires = ["setuptools", "poetry-core>=1.0.0"]