Commits · 9a78349b7e6b1ef6948dccc74d363481f1278cf8 · Swain Lab / aliby / alibylite · GitLab

Snippets Groups Projects

Dec 06, 2023
- feat(pipeline): outputs version of BABY being used · 9a78349b
  pswain authored 1 year ago
  
  9a78349b
Nov 28, 2023
- bug(apply_merges): merges implementing on more than valid_merges · bac3de6a
  pswain authored 1 year ago
  
  bac3de6a
- bug(grouper): tinterval failing with arrays · 19e676d9
  pswain authored 1 year ago
  
  19e676d9
Nov 24, 2023
- bug(signal): timeinterval can now be a list or an int · f2f8d3e3
  pswain authored 1 year ago
  
  f2f8d3e3
Nov 23, 2023
- Merge branch 'devlite' of https://git.ecdf.ed.ac.uk/swain-lab/aliby/alibylite into devlite · c282a97c
  pswain authored 1 year ago
  
  c282a97c
- feat(metadata): added timeinterval to minimal_meta_swainlab · 0bce02e6
  pswain authored 1 year ago
  
  0bce02e6
- bug(bud_metric): indentation error causing crash when no bud_signal · f1f190d1
  Peter Swain authored 1 year ago
  
  f1f190d1
- bug(tiler): find_channels_per_position worked for one type of metadata only · 27da0ad4
  Peter Swain authored 1 year ago
  
  27da0ad4
Nov 14, 2023
- feat(Signal): returns None rather than error if data is missing · 5c9e7adc
  pswain authored 1 year ago
  
  5c9e7adc
Nov 10, 2023
- reverted baby_client; feat(swainlab_parser): tolerate non-ascii characters · 02f7587b
  pswain authored 1 year ago
  
  02f7587b
Nov 03, 2023
- bud_metric returns all cells; Signal's get_raw give merges and picks as options. · f5e78af0
  pswain authored 1 year ago
  
  f5e78af0
- fix(abc.update): to update a param in an existing param dict · a8e05eae
  pswain authored 1 year ago
  
  a8e05eae
Nov 02, 2023
- feat(babysitter): removed pixel_size; docs(bud_metric) · fb7a49e8
  pswain authored 1 year ago
  
  fb7a49e8
Nov 01, 2023
- feat(babysitter): added pixel_size to BabyParameters · 7b770b3f
  pswain authored 1 year ago
  
  7b770b3f
Oct 31, 2023
- fix(baby_sitter): parameters passed to Baby's brain · 942aa01e
  pswain authored 1 year ago
  
  942aa01e
- added baby_sitter to run new version of BABY · abc8df96
  pswain authored 1 year ago
  
  abc8df96
Oct 29, 2023
- extended bgsub to multichannel functions · 4fc31051
  pswain authored 1 year ago
  
  4fc31051
- made background subtraction a separate function in extractor · e5d83cf7
  pswain authored 1 year ago
  
  e5d83cf7
Oct 27, 2023
- updated pipeline to no longer call defaults · 38521cfe
  pswain authored 1 year ago
  
  38521cfe
- removed defaults because of global_parameters; functions to extractor · 83572b7f
  pswain authored 1 year ago
  
  83572b7f
- docs to logging · 0252277b
  pswain authored 1 year ago
  
  0252277b
- docs for metadata · 2a030b66
  pswain authored 1 year ago
  
  2a030b66
- renamed dunder routines in indexing · d43d5710
  pswain authored 1 year ago
  
  d43d5710
- renamed processor; some tidying · 75686e0c
  pswain authored 1 year ago
  
  75686e0c
Oct 26, 2023
- removed chainer; NameGrouper is now Grouper · dd6a27d3
  pswain authored 1 year ago
  
  dd6a27d3
- partway removal of chainer · 6a5afb7c
  pswain authored 1 year ago
  
  6a5afb7c
Oct 25, 2023
- changed channels in tiler to be position dependent · fb9f017e
  pswain authored 1 year ago
  
  fb9f017e
Oct 20, 2023
- added signal's retained cutoff to global_parameters · eee67de6
  pswain authored 1 year ago
  
  eee67de6
- added global_parameters to define all hardcoded parameters · 0a443f0f
  pswain authored 1 year ago
  
  0a443f0f
- cleaned and documented tiler · 8b4bfacd
  pswain authored 1 year ago
  
  8b4bfacd
- changed load_attributes to load_meta · 793ce5d7
  pswain authored 1 year ago
  
  793ce5d7
- changed max5px to max5px_median · b95e79fc
  pswain authored 1 year ago
  
  b95e79fc
- added more documentation · 87a20fd8
  pswain authored 1 year ago
  
  87a20fd8
Oct 19, 2023
- Cleaned up and documented Cells · 898fd93b
  pswain authored 1 year ago
  
  898fd93b
Oct 13, 2023
- fixed incompatibility between baby and scikit-learn 1.3 · 919df367
  pswain authored 1 year ago
  
  919df367
- updated .toml to include aliby-baby as default · ff6c21b5
  pswain authored 1 year ago
  
  ff6c21b5
Oct 12, 2023
- Merge remote-tracking branch 'origin/dev' into bud · 2422c669
  pswain authored 1 year ago
  
  2422c669
Oct 06, 2023
- stop grouper from exiting with assertion if cannot find data · ad558e11
  pswain authored 1 year ago
  
  ad558e11
- tidying: deleted phlourin bits from processor · 0feb0543
  pswain authored 1 year ago
  
  0feb0543
Oct 02, 2023
- removed duplicate line for ref_channel in tiler · 572b1787
  pswain authored 1 year ago
  
  572b1787