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Swain Lab
aliby
alibylite
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ac81b5fab548633ad34ec40d565c18ecf8546344
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Branches
4
cellpose
dev
protected
devlite
default
master
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20
v0.1.64
v0.1.61
v0.1.60
v0.1.59
v0.1.58
v0.1.57
v0.1.56
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Created with Raphaël 2.2.0
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test(aliby): fix non-iterable in pytest parametrize
test(aliby): ImageDummy.pad_array() method
feat(aliby): tiler method to instantiate output from dummy image
feat(aliby): method to pad dask array with zeros
<fix>(writer.py): <Removed check of data type befor writing timepoint column in writer>
Changes to docs in extractor in line with pylsp
Corrected typo in signal
final docs for postprocessor
docs(aliby): correct standard image array indexing order
docs(aliby): describe image module & improve class descriptions
docs(aliby): clarify parameters of dummy tiler method
docs(aliby): clarify rationale of dummy image class & its methods
trap to tile and others
[WIP] refactor(aliby): structure of dummy image class
[WIP] feat(aliby): instantiate Tiler object from dummy image
[WIP] feat(aliby): base image class lazy-loads dummy image
feat(examples): dummy image for tiler input
Merge remote-tracking branch 'origin/dev' into logging
change(log): add _log to DynamicWriter
change(track): add utils.py
Merge branch 'dev' into 053-dummy-image
change(aliby): add track_abc
Merge branch 'cleanup' into 'dev'
change(aliby): add cell_tracker and bud_tracker
spelling mistake
refactor: Remove unused code and obsolete tests
change(aliby): warn->debug time conversion except
Merge branch 'coverage' into 'dev'
test(postproc): whether interpolate fills in existing values
"More on grouper"
docs(install): fix formatting
change(docs): add FAQ for Windows installation
change(aliby): Replace prints -> self._log
change(aliby): Replace print -> self._log
change(aliby): rename Process._logger -> _log
Merge branch 'logging' into 053-dummy-image
more docs, mostly signal
refactor(aliby): remove duplicate & reorder magic attributes
[WIP] ci: measure branch coverage
change(aliby): Set logging handler levels
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