change: added example scripts for imageviewer

examples/run_imageviewer.py

-from wela.imageviewer import LocalImageViewer, get_files
+from wela.imageviewer import ImageViewer
 
-
-aliby_input = "/Users/pswain/wip/aliby_input/"
 aliby_output = "/Users/pswain/wip/aliby_output/"
-omero_name = "test26643"
-position = "001"
+omero_name = "2104_2024_03_29_Aggregation_to_0pc_glc_sorb_00"
+position = "ch11_Gcd6_001"
+
+# ADD details
+server_info = {
+    "host": "",
+    "username": "",
+    "password": "",
+}
 
-# for zarr files
-liv = LocalImageViewer(
-    *get_files(
-        aliby_input,
-        aliby_output,
-        omero_name,
-        position,
-    )
+h5file = f"{aliby_output}{omero_name}/{position}.h5"
+iv = ImageViewer.remote(h5file, server_info, 2104)
+tpt_end = 10
+# for information only
+iv.print_traps_with_cells(tpt_end)
+# use Napari to view cells
+# python -m pip install "napari[all]" --upgrade
+iv.view(
+    trap_ids=[4, 8, 13],
+    tpt_end=tpt_end,
+    channels_to_skip=["cy5"],
+    no_vertical_tiles=1,
 )
-liv.view(trap_id=1, tps=8)

examples/run_local_imageviewer.py

+from wela.imageviewer import ImageViewer, get_files
+
+
+aliby_input = "/Users/pswain/wip/aliby_input/"
+aliby_output = "/Users/pswain/wip/aliby_output/"
+omero_name = "25681_2022_04_30_flavin_htb2_glucose_10mgpL_01_00"
+position = "htb2mCherry_018"
+
+# for zarr files
+iv = ImageViewer.local(
+    **get_files(
+        aliby_input,
+        aliby_output,
+        omero_name,
+        position,
+    )
+)
+tpt_end = 14
+iv.print_traps_with_cells(tpt_end=tpt_end)
+iv.view(
+    tpt_end=tpt_end,
+    trap_ids=[1, 2, 3, 6, 48, 49, 50, 51, 52, 53, 54, 55, 87, 88, 92, 93],
+    no_vertical_tiles=3,
+)