Commits · a1394ad8748320f96c328fe66cfe9bddfa9a2792 · Swain Lab / wela · GitLab

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Nov 06, 2024
- uploaded data files for mutual information estimation; uploaded data for... · a1394ad8
  s1732775 authored 4 months ago
  
  uploaded data files for mutual information estimation; uploaded data for processing some data thru aliby and wela
  a1394ad8
- committing jupyter notebooks for optimising SVM part of MI estimation, and... · a689ab50
  s1732775 authored 4 months ago
  
  committing jupyter notebooks for optimising SVM part of MI estimation, and using LSTM in place of SVM.
  a689ab50
Nov 04, 2024
- Merge remote-tracking branch 'origin/HEAD' · 2386382b
  s1732775 authored 4 months ago
  
  2386382b
Oct 30, 2024
- feature(dataloader): check postprocessing in h5s · 1712590a
  pswain authored 4 months ago
  
  1712590a
- fix(parse_h5): removed spurious breakpoint · 84a2438e
  pswain authored 4 months ago
  
  84a2438e
Oct 25, 2024
- corrected if statements to avoid ambiguity of Crange · dd88d432
  s1732775 authored 4 months ago
  
  dd88d432
Oct 24, 2024
- Update README.md · 19d1dbc1
  pswain authored 4 months ago
  
  19d1dbc1
- change(run_MI): added axes labels · ed2c4991
  pswain authored 4 months ago
  
  ed2c4991
- fix(run_MI): fixed import · 9fc97dde
  pswain authored 4 months ago
  
  9fc97dde
- feature: added MIdecoding and an example script · 9aa0665b
  pswain authored 4 months ago
  
  9aa0665b
Oct 16, 2024
- change(plot_binned): variables renamed for clarity · 0f680a6e
  pswain authored 5 months ago
  
  0f680a6e
Oct 15, 2024
- feature(dataloader): add_array_to_df · b3ddc43d
  pswain authored 5 months ago
  
  b3ddc43d
Oct 14, 2024
- feature(get_time_series): returns dataloader IDs · 6feda8b3
  pswain authored 5 months ago
  
  6feda8b3
- fix(plot_lineage): shading for all subplots · 7df7e659
  pswain authored 5 months ago
  
  7df7e659
- change: include_whole_cell -> add_whole_cell · 5bed58fc
  pswain authored 5 months ago
  
  Also calculates cell_growth_rate.
  5bed58fc
- Merge branch 'master' of https://git.ecdf.ed.ac.uk/swain-lab/wela · 859ae25a
  pswain authored 5 months ago
  
  859ae25a
- fix(flavin_filter): now skips all nan signal · 827b32f7
  pswain authored 5 months ago
  
  827b32f7
Oct 11, 2024
- change(plot_binned): option to return results · 97faf3ab
  pswain authored 5 months ago
  
  97faf3ab
- fix(growth_rate): bud bounds not updating · d8146d14
  pswain authored 5 months ago
  
  d8146d14
- change(dataloader): added projection variable · d35c0f8e
  pswain authored 5 months ago
  
  d35c0f8e
- feature(parse_h5): added · 8130f4b9
  pswain authored 5 months ago
  
  8130f4b9
Oct 08, 2024
- feature(dataloader): added whole-cell signals · 5d7080b3
  pswain authored 5 months ago
  
  5d7080b3
Oct 07, 2024
- change(plot_binned): x_signal can equal y_signal · f10d6c39
  pswain authored 5 months ago
  
  f10d6c39
Oct 04, 2024
- change(plot_binned): added palette · a12cb09e
  pswain authored 5 months ago
  
  a12cb09e
Oct 02, 2024
- feature(plotting): ylim to plot_binned · 73601db9
  pswain authored 5 months ago
  
  73601db9
- fix(correct_buds): check if index in bud-signal df · dbd54576
  pswain authored 5 months ago
  
  dbd54576
- fix(dataloader): np.any to len for list · 5b807796
  pswain authored 5 months ago
  
  5b807796
Sep 24, 2024
- change(dataloader): added check for bud signals · beb9e829
  pswain authored 5 months ago
  
  Check h5 files before running postprocessor.
  beb9e829
Sep 20, 2024
- added to gallery · 35759b19
  pswain authored 5 months ago
  
  35759b19
- added to gallery · aa41e05f
  pswain authored 5 months ago
  
  aa41e05f
Sep 18, 2024
- fix: failing to save data for some mothers · 75d0aff7
  pswain authored 6 months ago
  
  in parallel processing; removed two-step running
  75d0aff7
Sep 10, 2024
- added gallery for plotting · 52f878ca
  pswain authored 6 months ago
  
  52f878ca
Sep 07, 2024
- change: added sort to get_h5files · 6a681315
  pswain authored 6 months ago
  
  6a681315
Sep 06, 2024
- changed(dataloader): added bg_sub · 19ae0d9d
  pswain authored 6 months ago
  
  19ae0d9d
Sep 05, 2024
- pyproject.toml for new dir structure · 33edc4a0
  pswain authored 6 months ago
  
  33edc4a0
Aug 27, 2024
- fix(classic_periodogram): puts data into rows · 82eeb200
  pswain authored 6 months ago
  
  82eeb200
Aug 12, 2024
- fix(sorting): fixed misnamed sort_by · 9798d17e
  pswain authored 7 months ago
  
  9798d17e
Aug 09, 2024
- change: plot_binned_mean -> plot_binned · 1790f15c
  pswain authored 7 months ago
  
  More general version.
  1790f15c
Aug 08, 2024
- Merge branch 'master' of https://git.ecdf.ed.ac.uk/swain-lab/wela · 2dea9bd3
  pswain authored 7 months ago
  
  2dea9bd3
- change: added misc.py, bud_area to dataloader · af0e5f7f
  pswain authored 7 months ago
  
  af0e5f7f