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Swain Lab
wela
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20ac636c6a53ec64f5f06232263f310b7571241f
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dev
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master
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Created with Raphaël 2.2.0
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feature(imageviewer): added from_tiler
dev
dev
imageviewer: created get_masks
change(imageviewer): last timepoint not included
fix: bug in run_imageviewer
doc(autocrosscorr)
change(imageviewer): added tp_start
docs(dataloader): update
Merge branch 'dev' of https://git.ecdf.ed.ac.uk/swain-lab/wela into dev
change(plotting): kymograph into subfunctions
feature(plotting): added label to bud_to_bud
feature(autocrosscorr): added plot_autocrosscorr
change(autocrosscorr): docs
refactor(dataloader): minor tidy
refactor(dataloader): added staticmethod
change(plot_lineage): refactored; yy plot
change(dataloader): add_whole_cell now automatic
change(dataloader): automated fluorescence signals
Merge branch 'dev' of https://git.ecdf.ed.ac.uk/swain-lab/wela into dev
change(dataloader): added docs for add_whole_cell
change: updated napari installation info
change: add run_imageviewer to examples
change: removed napari as a dependency
change: added napari as optional dependency
change: pyproject mirrors alibylite
Merge branch 'dev' of https://git.ecdf.ed.ac.uk/swain-lab/wela into dev
change: to python 3.11
Merge branch 'dev' of https://git.ecdf.ed.ac.uk/swain-lab/wela into dev
tweak
feature(examples): added growth_rate_from_pkl.py
feature(dataloader): added drop_nan_rows as option
change(run_wela): changed to GFP_Z
fix: typo in run_wela.py
change(run_wela): tpt_end -> tp_end
change(imageviewer): tpt->tp; initial_tp
fix(dataloader): error in position, trap, cell
fix(growth_rate): Inf causing errors
master
master
split notebooks and tried out lstm.
feature(imageviewer): highlight a single cell
fix(dataloader): id's trap and cell ordered wrong
fix(plot_lineage): failed if only one subplot
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