Allowed for multiple QC reports

submit_trio_wes_archive_project.sh

@@ -36,6 +36,7 @@ DIRS=$(echo $PRIORITY_DIRS | tr ":" "\n")
 for dir in $DIRS
 do
   rsync -av $dir $ARCHIVE_DIR/prioritization/
+  rsync -av $dir.md5sum.txt $ARCHIVE_DIR/prioritization/
 done
 
 # move to the archive area and check the md5s

submit_trio_wes_priority_and_qc_checksums.sh

@@ -16,9 +16,12 @@ source $CONFIG_SH
 
 cd $OUTPUT_DIR/qc
 
-md5sum ${PROJECT_ID}_qc_report.html > ${PROJECT_ID}_qc_report.md5sum.txt
+for file in ${PROJECT_ID}_qc_report*.html
+do
+  md5sum $file >> ${PROJECT_ID}_qc_report.md5sum.txt
+done
 
-for file in `find ${PROJECT_ID}_qc_report_data -type f`
+for file in `find ${PROJECT_ID}_qc_report*_data -type f`
 do
   md5sum $file >> ${PROJECT_ID}_qc_report.md5sum.txt
 done