We already had gnomAD 3.0 compiled and downloaded from another bcbio installation, so this gets copied to /home/u035/project/software/bcbio/genomes/Hsapiens/hg38/variation.
We already had gnomAD 3.0 compiled and downloaded from another bcbio installation, so this gets copied to /home/u035/project/software/bcbio/genomes/Hsapiens/hg38/variation.
Put a fake file name for genotype2phenotype field in genomes/hg38/seq/hg38-resources.yaml
Increase JVM memory for GATK in galaxy/bcbio_system.yaml
Increase JVM memory for GATK in galaxy/bcbio_system.yaml