Commits · af6f834a71a6830d15ce2f46ce8aadee51041be4 · Swain Lab / aliby / alibylite

Jun 27, 2023
- fix(poetry): update aliby-baby deps · af6f834a
  Alán Muñoz authored 1 year ago
  
  af6f834a
- chore(poetry): upgrade aliby-baby dep · 00f7f01f
  Alán Muñoz authored 1 year ago
  
  00f7f01f
May 16, 2023

docs(aliby): image annotation commands and destination file · fb8225d2

WHY IS THIS CHANGE NEEDED?:
- user needs to know these if they use the annotation script

HOW DOES THE CHANGE SOLVE THE PROBLEM?:
- edit docstring in top of file

fb8225d2

Apr 04, 2023
- fix(bud_metric): fix np choose axes · 8a1b4758
  Alán Muñoz authored 1 year ago
  
  8a1b4758
Apr 03, 2023
- change(signal): nly provide avaiable channels · 4541541b
  Alán Muñoz authored 1 year ago
  
  4541541b
- fix(pp): refresh bud_metric and merging · 8ef3726c
  Alán Muñoz authored 1 year ago
  
  8ef3726c
- change(bud_metric): incorporate mother_label level · 75951753
  Alán Muñoz authored 1 year ago
  
  75951753
- fix(pp): apply snake_case before pascal @autofetch · fb5e7b3e
  Alán Muñoz authored 1 year ago
  
  fb5e7b3e
- change(pp): add def, typing to lineage process abc · da8c929c
  Alán Muñoz authored 1 year ago
  
  da8c929c
Mar 23, 2023
- fix(pp): squash typo bugs and indexing · 287db15d
  Alán Muñoz authored 2 years ago
  
  287db15d
- Merge branch 'merge_pp_dev' into 'dev' · 5b885b36
  Alan Muñoz authored 2 years ago
  
  Merge pp dev See merge request aliby/aliby!17
  5b885b36
- Merge pp dev · a1d7372b
  Alan Muñoz authored 2 years ago
  
  a1d7372b
Mar 21, 2023
- chore(pyproject): bump version · 4e096148
  Alán Muñoz authored 2 years ago
  
  v0.1.61
  
  4e096148
- fix(kymograph): fix import typo · 13671055
  Alán Muñoz authored 2 years ago
  
  13671055
- chore(pyproject): bump version · 02719b51
  Alán Muñoz authored 2 years ago
  
  02719b51
- fix(signal): import get_raw from self · 72a6e5c1
  Alán Muñoz authored 2 years ago
  
  v0.1.60
  
  72a6e5c1
- chore(pyproject): bump version · f6c5b8fd
  Alán Muñoz authored 2 years ago
  
  f6c5b8fd
- [WIP]fix(chainer): refresh standard processing · bbf30f85
  Alán Muñoz authored 2 years ago
  
  bbf30f85
Mar 20, 2023
- refactor(merge): add indexing merge functions · e1c36f24
  Alán Muñoz authored 2 years ago
  
  e1c36f24
- fix(chainer): search lineage_merged -> lineage · bfddc70d
  Alán Muñoz authored 2 years ago
  
  bfddc70d
- refactor(processor): isolate merge_association · e38b5a3d
  Alán Muñoz authored 2 years ago
  
  e38b5a3d
- tweak(merge): fix warnings and minor speedups · d345aa21
  Alán Muñoz authored 2 years ago
  
  d345aa21
- tweak(pipeline): show clogging only after 30% · a12b19b5
  Alán Muñoz authored 2 years ago
  
  a12b19b5
- tweak(abc): warn -> warning due to depr · 5366c20f
  Alán Muñoz authored 2 years ago
  
  5366c20f
- change(indexing): minor speed up to array conv · 63275819
  Alán Muñoz authored 2 years ago
  
  63275819
- tweak(pyproject): adjust annotate function · c21c4fce
  Alán Muñoz authored 2 years ago
  
  c21c4fce
- fix(pp): refactored picker returns proper shape · dc5fe6b2
  Alán Muñoz authored 2 years ago
  
  dc5fe6b2
Mar 17, 2023
- docs(index): Include pipeline in index · 7a9380ac
  Alán Muñoz authored 2 years ago
  
  7a9380ac
- docs(readme): refresh RemoteImageViewer info · 8e2efc00
  Alán Muñoz authored 2 years ago
  
  8e2efc00
- tests(parser): add header of swainlab parser · 993d6d4d
  Alán Muñoz authored 2 years ago
  
  993d6d4d
- fix(postprocessing): enforce float16 · c30761fb
  Alán Muñoz authored 2 years ago
  
  c30761fb
- fix(bclient):tiler-model shape assert only if z!=5 · 17eac08b
  Alán Muñoz authored 2 years ago
  
  17eac08b
- feat(baby_client): assert model-tiler shape match · 52f24aea
  Alán Muñoz authored 2 years ago
  
  52f24aea
- Merge remote-tracking branch 'origin/dev' into imageviewer · 563438cf
  Alán Muñoz authored 2 years ago
  
  563438cf
- fix(writer): only create dset when nonexistent · 3b0c27fc
  Alán Muñoz authored 2 years ago
  
  3b0c27fc
- refactor(aliby): PosixPath->Path · b16333f2
  Alán Muñoz authored 2 years ago
  
  b16333f2
- fix(pp): Convert lineage to 3d when any found · a18741f3
  Alán Muñoz authored 2 years ago
  
  v0.1.59
  
  a18741f3
- fix(writer): Ensure tps are always saved into h5 · de3e61e0
  Alán Muñoz authored 2 years ago
  
  de3e61e0
- docs(install): Add detailed windows instructions · 7f01a03f
  Alán Muñoz authored 2 years ago
  
  7f01a03f
- chore(pyproject): bump version · e79892ce
  Alán Muñoz authored 2 years ago
  
  v0.1.58
  
  e79892ce