Commits · f136aefa35638d5a6605cdff74e2a625d239eaf2 · Swain Lab / aliby / alibylite · GitLab

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Jan 11, 2023
- change(docs): add FAQ for Windows installation · f136aefa
  Alán Muñoz authored 2 years ago
  
  f136aefa
- change(aliby): Replace prints -> self._log · 36430a7d
  Alán Muñoz authored 2 years ago
  
  36430a7d
- change(aliby): Replace print -> self._log · 6d5e3447
  Alán Muñoz authored 2 years ago
  
  6d5e3447
- change(aliby): rename Process._logger -> _log · edad2154
  Alán Muñoz authored 2 years ago
  
  edad2154
- change(aliby): Set logging handler levels · 99bf728d
  Alán Muñoz authored 2 years ago
  
  99bf728d
Jan 10, 2023
- feat(aliby): integrate logging into existing steps · de4c25e7
  Alán Muñoz authored 2 years ago
  
  de4c25e7
- feat(aliby): add logging to pipeline · a0dac1cb
  Alán Muñoz authored 2 years ago
  
  a0dac1cb
- feat(aliby): add logging to Signal · fdae2e39
  Alán Muñoz authored 2 years ago
  
  fdae2e39
- feat(aliby): add abstract StepABC · da3d8f0e
  Alán Muñoz authored 2 years ago
  
  da3d8f0e
- change(pipeline): Generate local logger · 8aa72b34
  Alán Muñoz authored 2 years ago
  
  8aa72b34
- change(meta): Skip aliby reserved filename · f0adae27
  Alán Muñoz authored 2 years ago
  
  f0adae27
- change(logging): use ISO8061 time format · e75a2378
  Alán Muñoz authored 2 years ago
  
  e75a2378
- fix(aliby): Remove BridgeOmero import in omero.py · 0e274665
  Alán Muñoz authored 2 years ago
  
  0e274665
Jan 09, 2023
- Merge remote-tracking branch 'origin/dev' into dev · 5538c2dd
  Alán Muñoz authored 2 years ago
  
  5538c2dd
- change(aliby): Remove Image from typing in Tiler · 7a420b21
  Alán Muñoz authored 2 years ago
  
  7a420b21
- change(aliby): remove Image call in Tiler · dfbccc23
  Alán Muñoz authored 2 years ago
  
  dfbccc23
- change(aliby): explain location of omero Dataset · e2d096e6
  Alán Muñoz authored 2 years ago
  
  e2d096e6
- change(aliby): move omero Image to omero.py · c78d0427
  Alán Muñoz authored 2 years ago
  
  c78d0427
- change(aliby): move/lazy-load omero dataset class · 1c668ecc
  Alán Muñoz authored 2 years ago
  
  1c668ecc
- change(aliby): sort dataset imports and clean · 356e27ec
  Alán Muñoz authored 2 years ago
  
  356e27ec
- Merge 'origin/doc2' into merge_docs · ba5266d4
  Alán Muñoz authored 2 years ago
  
  ba5266d4
- remove(ext): delete faiss and k2_major_median · 176aa03f
  Alán Muñoz authored 2 years ago
  
  176aa03f
- chore(pyproject): Remove faiss-gpu from deps · 802996f6
  Alán Muñoz authored 2 years ago
  
  802996f6
Jan 08, 2023
- ci(aliby): run pytest inside poetry · cdb9abc4
  Alán Muñoz authored 2 years ago
  
  cdb9abc4
- ci(aliby): fix extraction of downloaded expt · 34fad656
  Alán Muñoz authored 2 years ago
  
  34fad656
- ci(aliby): activate full install for net tests · 50008edb
  Alán Muñoz authored 2 years ago
  
  50008edb
- change(aliby): Ignore pipeline in local tests · a443cafb
  Alán Muñoz authored 2 years ago
  
  a443cafb
- change(aliby): remove local integration stage · 262ad7da
  Alán Muñoz authored 2 years ago
  
  262ad7da
- change(aliby): move tests to network stage · 76745b11
  Alán Muñoz authored 2 years ago
  
  76745b11
- change(aliby): add coverage to pyproject and lock · 8cbb62e8
  Alán Muñoz authored 2 years ago
  
  8cbb62e8
- fix(CI): update filename and single experiment dir · 732e33bb
  Alán Muñoz authored 2 years ago
  
  732e33bb
- test(pipeline): outcommen test content · dfccfc28
  Alán Muñoz authored 2 years ago
  
  dfccfc28
- tests(pipeline): add local tests · bca3f582
  Alán Muñoz authored 2 years ago
  
  bca3f582
- feat(CI): add minimal pipeline test to ci · e4d1a55f
  Alán Muñoz authored 2 years ago
  
  e4d1a55f
Jan 07, 2023
- fix(ImageDir): sort dimensions. Pipeline runs · 4e6fc16b
  Alán Muñoz authored 2 years ago
  
  4e6fc16b
- fix(pipeline): convert path to str before storing · 120c267b
  Alán Muñoz authored 2 years ago
  
  120c267b
- feat(DynamicWriter): Only load meta if file exists · b0b6d869
  Alán Muñoz authored 2 years ago
  
  b0b6d869
- fix(dataset): pass kwargs as-is for ome dataset · 8eeb2bf8
  Alán Muñoz authored 2 years ago
  
  8eeb2bf8
- refactor(image): self.meta -> self._meta · eddbddcb
  Alán Muñoz authored 2 years ago
  
  eddbddcb
- [WIP]feat(extraction): support metaless channels · c0debe3e
  Alán Muñoz authored 2 years ago
  
  c0debe3e