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Commit dab393d6 authored by Alán Muñoz's avatar Alán Muñoz
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rm unused imports

parent 70c99a84
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import os
from pathlib import Path, PosixPath
from collections.abc import Iterable
import logging
from time import perf_counter
# from copy import copy
from typing import Union, List, Dict, Callable
from datetime import datetime
import numpy as np
import pandas as pd
from scipy.sparse import dok_matrix, vstack, issparse
from tqdm import tqdm
from extraction.core.functions.loaders import (
load_funs,
......@@ -30,15 +21,13 @@ from agora.io.writer import Writer, load_attributes
from agora.io.cells import CellsLinear
from aliby.tile.tiler import Tiler
import matplotlib.pyplot as plt
CELL_FUNS, TRAPFUNS, FUNS = load_funs()
CUSTOM_FUNS, CUSTOM_ARGS = load_custom_args()
RED_FUNS = load_redfuns()
MERGE_FUNS = load_mergefuns()
# Assign datatype depending on the metric used
m2type = {"mean": np.float32, "median": np.ubyte, "imBackground": np.ubyte}
# m2type = {"mean": np.float32, "median": np.ubyte, "imBackground": np.ubyte}
class ExtractorParameters(ParametersABC):
......
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