Commits · 38521cfeb9029f5a10df649578da23e705466e0e · Swain Lab / aliby / alibylite · GitLab

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Oct 27, 2023
- updated pipeline to no longer call defaults · 38521cfe
  pswain authored 1 year ago
  
  38521cfe
- removed defaults because of global_parameters; functions to extractor · 83572b7f
  pswain authored 1 year ago
  
  83572b7f
- docs to logging · 0252277b
  pswain authored 1 year ago
  
  0252277b
- docs for metadata · 2a030b66
  pswain authored 1 year ago
  
  2a030b66
- renamed dunder routines in indexing · d43d5710
  pswain authored 1 year ago
  
  d43d5710
- renamed processor; some tidying · 75686e0c
  pswain authored 1 year ago
  
  75686e0c
Oct 26, 2023
- removed chainer; NameGrouper is now Grouper · dd6a27d3
  pswain authored 1 year ago
  
  dd6a27d3
- partway removal of chainer · 6a5afb7c
  pswain authored 1 year ago
  
  6a5afb7c
Oct 25, 2023
- changed channels in tiler to be position dependent · fb9f017e
  pswain authored 1 year ago
  
  fb9f017e
Oct 20, 2023
- added signal's retained cutoff to global_parameters · eee67de6
  pswain authored 1 year ago
  
  eee67de6
- added global_parameters to define all hardcoded parameters · 0a443f0f
  pswain authored 1 year ago
  
  0a443f0f
- cleaned and documented tiler · 8b4bfacd
  pswain authored 1 year ago
  
  8b4bfacd
- changed load_attributes to load_meta · 793ce5d7
  pswain authored 1 year ago
  
  793ce5d7
- changed max5px to max5px_median · b95e79fc
  pswain authored 1 year ago
  
  b95e79fc
- added more documentation · 87a20fd8
  pswain authored 1 year ago
  
  87a20fd8
Oct 19, 2023
- Cleaned up and documented Cells · 898fd93b
  pswain authored 1 year ago
  
  898fd93b
Oct 13, 2023
- fixed incompatibility between baby and scikit-learn 1.3 · 919df367
  pswain authored 1 year ago
  
  919df367
- updated .toml to include aliby-baby as default · ff6c21b5
  pswain authored 1 year ago
  
  ff6c21b5
Oct 12, 2023
- Merge remote-tracking branch 'origin/dev' into bud · 2422c669
  pswain authored 1 year ago
  
  2422c669
Oct 06, 2023
- stop grouper from exiting with assertion if cannot find data · ad558e11
  pswain authored 1 year ago
  
  ad558e11
- tidying: deleted phlourin bits from processor · 0feb0543
  pswain authored 1 year ago
  
  0feb0543
Oct 02, 2023
- removed duplicate line for ref_channel in tiler · 572b1787
  pswain authored 1 year ago
  
  572b1787
Sep 29, 2023
- fixed merge_lineage for when no valid lineages · 5025e81e
  pswain authored 1 year ago
  
  5025e81e
Aug 14, 2023
- partway through add multichannel op to extractor · 43b39090
  pswain authored 1 year ago
  
  43b39090
Aug 12, 2023
- renamed variables in extractor · 109b10f2
  pswain authored 1 year ago
  
  109b10f2
Aug 11, 2023
- added moment_of_inertia to cell functions · 85a66bb2
  pswain authored 1 year ago
  
  85a66bb2
Aug 10, 2023
- hack in reduce_extract to pass tests: labels to cell_labels · ff678c65
  pswain authored 1 year ago
  
  ff678c65
- tidying of pipeline · a645c836
  pswain authored 1 year ago
  
  a645c836
- tided pipeline; moved checks to extractor · c83a6ff4
  pswain authored 1 year ago
  
  c83a6ff4
Aug 09, 2023
- cleaned extractor · b46069ce
  pswain authored 1 year ago
  
  b46069ce
Aug 07, 2023
- update merge to remove merges causing buds with two mothers · 20a50b5e
  pswain authored 1 year ago
  
  20a50b5e
- tidied signal's get_prepost · 5051876a
  pswain authored 1 year ago
  
  5051876a
- removed breakpoint() · f51c8b0e
  pswain authored 1 year ago
  
  f51c8b0e
- finished refactoring merging and picking · ad94fc78
  pswain authored 1 year ago
  
  ad94fc78
Aug 06, 2023
- fixed merging causing one bud to have multiple mothers · a43b512d
  pswain authored 1 year ago
  
  a43b512d
Jul 28, 2023
- fixing merge · ad973bf1
  pswain authored 1 year ago
  
  ad973bf1
- finished docs on tracks; rewrote for transparency · a533b16b
  pswain authored 1 year ago
  
  a533b16b
Jul 26, 2023
- unfinished docs on tracks · ab99d9fb
  pswain authored 1 year ago
  
  ab99d9fb
- Merge branch '072-crosscorr-stationary' into 'dev' · 95958192
  Arin Wongprommoon authored 1 year ago
  
  feat(postproc): crosscorr has stationary option See merge request aliby/aliby!18
  95958192
- test(postproc): autocorrelation using croscorr process · 58ef0dea
  Arin Wongprommoon authored 1 year ago
  
  58ef0dea