Fixing fake BCBio

pipeline/main.nf

@@ -75,9 +75,7 @@ workflow prepare_bcbio_config {
     
     main:
         ch_merged_fastqs = merge_fastqs(ch_samplesheet_info)
-        ch_merged_data = ch_individuals_by_family.map(
-            { k, v -> v }
-        )
+        ch_merged_data = ch_individuals_by_family.map({ k, v -> v })
         .join(ch_merged_fastqs)
         .map(
             { sample_id, family_id, father, mother, sex, phenotype, r1s, r2s, merged_r1, merged_r2 ->

tests/scripts/bcbio_nextgen.py

-#/usr/bin/env python
+#!/usr/bin/env python
 """
 Fake BCBio for testing with the empty datasets from tests/assets/
 """